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Download |
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The abundance (IAF) and versatility (IVF) scores
of all the domain-unit in RefSeq proteins are available for
download. The data are presented in simple tab-delimited text
file (for easy parsing of the data). |
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Download [gz](~110K) |
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Tab-delimited one line of the files consists of
the following consecutive fields. |
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Field |
Description |
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No_domain |
Number of Pfam domains in
current domain unit. |
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Domain_unit |
Single Pfam domain or combined double Pfam domains (ex,
PF00001^PF00002). |
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IAF_all(freq.) |
IAF value of current domain unit
(Frequency
of proteins containing the domain unit)
in all RefSeq proteins. |
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IAF_euk(freq.) |
IAF value of current domain unit
(Frequency
of proteins containing a domain unit)
in eukaryotic RefSeq proteins. |
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IAF_bac(freq.) |
IAF value of current domain unit
(Frequency
of proteins containing a domain unit)
in bacterial RefSeq proteins. |
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IAF_arc(freq.) |
IAF value of current domain unit
(Frequency
of proteins containing a domain unit)
in archaea RefSeq proteins. |
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IVF_all(family) |
IVF value of current domain unit
(partner
domain families N- and C-sides of a domain unit)
in all RefSeq proteins. |
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IVF_euk(family) |
IVF value of current domain unit
(partner
domain families N- and C-sides of a domain unit)in eukaryotic RefSeq proteins. |
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IVF_bac(family) |
IVF value of current domain unit
(partner
domain families N- and C-sides of a domain unit)
in bacterial RefSeq proteins. |
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IVF_arc(family) |
IVF value of current domain unit
(partner
domain families N- and C-sides of a domain unit)in archaea RefSeq proteins. |
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